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Journal: BMC Systems Biology
Article Title: ALC: automated reduction of rule-based models
doi: 10.1186/1752-0509-2-91
Figure Lengend Snippet: Model definition for the example system . Default values are assigned for all initial conditions and parameters that are not given. These default values can be freely chosen. Note that x ≥ xb and x > 0 hold for the initial conditions of the example system when using the standard default values (see ALC user guide). When running the C MEX, MATLAB and Mathematica models, the simulation results for R [ L , X ] and RXE are visualized as they are defined as outputs. RXp , x and xb are also visualized as this is automatically done for all variables that are defined in the section #layer connections .
Article Snippet: The core of the C MEX model is a
Techniques: